100-PE, 200bp insert library - SRA

SRX469409: 100-PE, 200bp insert library
1 ILLUMINA (Illumina HiSeq 2000) run: 82.9M spots, 16.7G bases, 10.3Gb downloads

Design: A pool of ~3000 San Diego copepods were placed in a beaker containing filtered seawater and kept at 20degree C with no food. Everyday for 5 days, water was changed, and a battery of antibiotics added to water in order to reduce marine microbes. After 5 days, animals were filtered into centrifuge tubes and genomic DNA isolated using QIAGEN DNeasy columns.

Submitted by: SCRIPPS INSTITUTION OF OCEANOGRAPHY

Study: Tigriopus californicus strain:San Diego Genome sequencing and assembly

PRJNA237968 • SRP037576 • All experiments • All runs

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This project aims at sequencing the genome of the marine copepod Tigriopus californicus. This species has served as an excellent model for studies of speciation, adaptation, and physiology.

Sample: Genome sequencing reads for Tigriopus californicus from San Diego

SAMN02640207 • SRS556701 • All experiments • All runs

Organism: Tigriopus californicus

Library:

Name: BT 200 SIPE

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: unspecified

Layout: PAIRED

Spot descriptor:

1 forward103 reverse

Runs: 1 run, 82.9M spots, 16.7G bases, 10.3Gb

Run	# of Spots	# of Bases	Size	Published
SRR1167889	82,854,637	16.7G	10.3Gb	2014-02-14

ID:: 649597

SRA

Sequence Read Archive

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